STRINGSTRING
ENSCING00000005042 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005042" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005042Uncharacterized protein (922 aa)    
Predicted Functional Partners:
Cin.19146
Uncharacterized protein ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (161 aa)
     
 
  0.961
tnpo1
Uncharacterized protein (756 aa)
     
 
  0.930
ENSCING00000007375
Uncharacterized protein (235 aa)
     
 
  0.917
ENSCING00000000257
Uncharacterized protein (167 aa)
     
 
  0.917
ENSCING00000021247
Uncharacterized protein (144 aa)
     
 
  0.879
ENSCING00000024718
Uncharacterized protein (342 aa)
       
 
  0.865
ENSCING00000020631
Uncharacterized protein (243 aa)
       
 
  0.865
ENSCING00000011362
Uncharacterized protein (283 aa)
       
 
  0.865
ENSCING00000012370
Uncharacterized protein (292 aa)
       
 
  0.865
ENSCING00000016737
Uncharacterized protein (308 aa)
     
 
  0.697
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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