STRINGSTRING
ENSCING00000005118 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005118" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005118Zinc finger protein (1202 aa)    
Predicted Functional Partners:
ENSCING00000003574
Uncharacterized protein (166 aa)
     
  0.785
Cin.24169
Uncharacterized protein (187 aa)
     
  0.784
ENSCING00000025062
Uncharacterized protein (1003 aa)
     
  0.784
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
  0.775
ENSCING00000008712
Uncharacterized protein (423 aa)
     
  0.775
smarcc2
Uncharacterized protein (639 aa)
     
  0.770
ENSCING00000012953
Uncharacterized protein (293 aa)
     
  0.766
ENSCING00000022359
Histone H3 (136 aa)
       
  0.760
ENSCING00000013118
Uncharacterized protein (147 aa)
       
  0.760
ENSCING00000002753
Histone H3 (136 aa)
       
  0.760
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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