STRINGSTRING
ENSCING00000005156 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005156" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005156Uncharacterized protein (119 aa)    
Predicted Functional Partners:
ENSCING00000007380
Uncharacterized protein (501 aa)
       
  0.992
srp68
Uncharacterized protein ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (594 aa)
     
  0.988
ENSCING00000002417
Uncharacterized protein ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (694 aa)
     
  0.987
ENSCING00000012007
60S ribosomal protein L36 (98 aa)
     
 
  0.778
ENSCING00000008014
Uncharacterized protein (281 aa)
     
 
  0.740
ENSCING00000009310
Uncharacterized protein (191 aa)
     
 
  0.728
r27a
R27a protein (155 aa)
     
 
  0.701
ENSCING00000000730
Uncharacterized protein (246 aa)
     
  0.677
ENSCING00000016078
60S ribosomal protein L27 (136 aa)
     
    0.669
ENSCING00000010423
Uncharacterized protein (112 aa)
     
 
    0.666
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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