STRINGSTRING
ENSCING00000005199 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005199" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005199Uncharacterized protein (266 aa)    
Predicted Functional Partners:
ENSCING00000021248
Uncharacterized protein (191 aa)
     
  0.999
rps13
40S ribosomal protein S13 (151 aa)
   
  0.999
ENSCING00000022358
Uncharacterized protein ; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (303 aa)
   
  0.999
ENSCING00000011298
Uncharacterized protein (102 aa)
     
  0.999
ENSCING00000001970
Uncharacterized protein (195 aa)
     
  0.999
ENSCING00000006306
40S ribosomal protein S8 (205 aa)
     
  0.999
ENSCING00000005083
Uncharacterized protein (154 aa)
     
  0.999
ENSCING00000005034
Uncharacterized protein (151 aa)
     
  0.999
ENSCING00000005250
Uncharacterized protein (157 aa)
     
  0.999
Cin.18922
40S ribosomal protein S6 (248 aa)
   
  0.999
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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