STRINGSTRING
Cin.25917 protein (Ciona intestinalis) - STRING interaction network
"Cin.25917" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.25917Uncharacterized protein ; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication (466 aa)    
Predicted Functional Partners:
ENSCING00000006904
DNA primase (436 aa)
   
  0.999
ENSCING00000003161
Uncharacterized protein (328 aa)
     
  0.996
ENSCING00000017214
Uncharacterized protein (276 aa)
     
  0.995
ENSCING00000001608
DNA polymerase (382 aa)
     
  0.995
ENSCING00000022114
Uncharacterized protein (143 aa)
     
  0.991
ENSCING00000003363
Uncharacterized protein (740 aa)
     
  0.985
ENSCING00000009655
DNA polymerase (2157 aa)
     
  0.968
ENSCING00000008722
Uncharacterized protein (165 aa)
     
 
  0.938
mcm4
Uncharacterized protein (785 aa)
     
  0.932
Cin.24611
Uncharacterized protein (798 aa)
     
  0.919
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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