STRINGSTRING
ENSCING00000005238 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005238" - Branched-chain-amino-acid aminotransferase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005238Branched-chain-amino-acid aminotransferase (410 aa)    
Predicted Functional Partners:
ENSCING00000008058
Uncharacterized protein (440 aa)
   
  0.937
ENSCING00000004269
Uncharacterized protein (363 aa)
   
  0.936
ENSCING00000014616
Uncharacterized protein (299 aa)
   
 
  0.904
ENSCING00000003707
Uncharacterized protein (637 aa)
     
 
  0.901
ENSCING00000022604
Uncharacterized protein (316 aa)
   
 
  0.864
ENSCING00000012466
Uncharacterized protein (332 aa)
   
 
  0.864
ENSCING00000009373
Uncharacterized protein (444 aa)
   
 
  0.864
ENSCING00000003426
L-lactate dehydrogenase (341 aa)
       
  0.841
gmps
Uncharacterized protein (688 aa)
       
  0.831
ENSCING00000002644
Uncharacterized protein (470 aa)
         
  0.818
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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