STRINGSTRING
slc27a4 protein (Ciona intestinalis) - STRING interaction network
"slc27a4" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc27a4Uncharacterized protein (656 aa)    
Predicted Functional Partners:
ENSCING00000004468
Uncharacterized protein (624 aa)
   
   
0.814
ENSCING00000002011
Uncharacterized protein (334 aa)
           
  0.561
ENSCING00000019644
Uncharacterized protein (2428 aa)
           
  0.509
ENSCING00000000567
Uncharacterized protein (458 aa)
           
  0.489
ENSCING00000004983
Uncharacterized protein (463 aa)
         
  0.478
ENSCING00000022360
Uncharacterized protein (640 aa)
     
 
  0.441
ENSCING00000002865
Uncharacterized protein (702 aa)
     
 
  0.441
ENSCING00000020440
Uncharacterized protein (103 aa)
           
  0.434
ENSCING00000019708
Lipase (401 aa)
       
 
  0.419
ENSCING00000008581
Lipase (411 aa)
       
 
  0.419
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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