STRINGSTRING
nemo-like protein (Ciona intestinalis) - STRING interaction network
"nemo-like" - Nemo-Like kinase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nemo-likeNemo-Like kinase (403 aa)    
Predicted Functional Partners:
tcf/lef
Transcription factor protein (351 aa)
       
  0.995
Tak1
Mitogen-activated protein kinase kinase kinase (190 aa)
       
0.976
ENSCING00000000409
Uncharacterized protein (787 aa)
     
      0.874
ENSCING00000023192
Uncharacterized protein (90 aa)
       
      0.868
foxo
Uncharacterized protein (213 aa)
       
    0.813
ENSCING00000005502
Uncharacterized protein (1352 aa)
       
      0.772
ENSCING00000007020
Uncharacterized protein (273 aa)
       
  0.748
CTNNB1
Beta-catenin (497 aa)
       
  0.748
ENSCING00000012996
Uncharacterized protein (151 aa)
   
 
  0.730
ENSCING00000019050
Uncharacterized protein (218 aa)
       
  0.673
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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