STRINGSTRING
ppan protein (Ciona intestinalis) - STRING interaction network
"ppan" - Suppressor of SWI4 1 homolog in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppanSuppressor of SWI4 1 homolog (453 aa)    
Predicted Functional Partners:
ENSCING00000009238
Uncharacterized protein (834 aa)
     
      0.997
ENSCING00000013374
Uncharacterized protein (177 aa)
     
 
  0.969
ENSCING00000025069
Uncharacterized protein ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (736 aa)
     
        0.960
ENSCING00000004801
Uncharacterized protein (657 aa)
     
        0.960
ENSCING00000018368
Uncharacterized protein (221 aa)
     
 
  0.943
ENSCING00000001858
Uncharacterized protein (225 aa)
     
 
  0.942
ENSCING00000007514
Uncharacterized protein (351 aa)
     
 
  0.939
ENSCING00000003086
Uncharacterized protein (504 aa)
     
      0.916
ENSCING00000021761
Uncharacterized protein (243 aa)
     
 
  0.888
ENSCING00000002177
Uncharacterized protein (324 aa)
     
 
  0.881
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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