STRINGSTRING
fig4 protein (Ciona intestinalis) - STRING interaction network
"fig4" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fig4Uncharacterized protein (706 aa)    
Predicted Functional Partners:
ENSCING00000006215
Uncharacterized protein (1922 aa)
     
  0.992
ENSCING00000003708
Uncharacterized protein (774 aa)
     
  0.974
ENSCING00000022402
Uncharacterized protein (430 aa)
 
 
  0.641
ENSCING00000004041
Uncharacterized protein (708 aa)
 
 
  0.593
ENSCING00000019709
Uncharacterized protein (150 aa)
     
  0.593
ENSCING00000012905
Uncharacterized protein (183 aa)
     
  0.593
ENSCING00000003389
Uncharacterized protein (931 aa)
     
  0.497
ENSCING00000008847
Uncharacterized protein (1057 aa)
     
  0.486
ENSCING00000004244
Uncharacterized protein (446 aa)
     
  0.479
ENSCING00000019401
Uncharacterized protein (146 aa)
     
  0.467
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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