STRINGSTRING
ENSCING00000013996 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000013996" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000013996Uncharacterized protein (582 aa)    
Predicted Functional Partners:
gtpbp4
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (639 aa)
     
 
  0.997
ENSCING00000013374
Uncharacterized protein (177 aa)
     
 
  0.997
ENSCING00000004789
Uncharacterized protein (814 aa)
     
      0.997
ENSCING00000004235
Uncharacterized protein (732 aa)
     
      0.997
ENSCING00000005419
Uncharacterized protein (754 aa)
     
  0.995
cbf
Transcription factor protein (612 aa)
     
  0.994
ENSCING00000019946
Uncharacterized protein (561 aa)
     
 
  0.994
ENSCING00000005462
Uncharacterized protein (533 aa)
     
 
  0.994
ENSCING00000010738
Uncharacterized protein (538 aa)
     
 
  0.993
ENSCING00000006069
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (786 aa)
     
 
  0.992
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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