STRINGSTRING
Cin.52946 protein (Ciona intestinalis) - STRING interaction network
"Cin.52946" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.52946Uncharacterized protein (406 aa)    
Predicted Functional Partners:
fta
Fta protein (127 aa)
     
  0.992
ENSCING00000008919
Uncharacterized protein (554 aa)
     
  0.899
ENSCING00000023365
Uncharacterized protein (196 aa)
       
 
  0.672
ENSCING00000008276
Uncharacterized protein (349 aa)
     
  0.639
ENSCING00000011466
Uncharacterized protein (646 aa)
     
  0.610
ENSCING00000006942
Uncharacterized protein (214 aa)
       
 
  0.609
ENSCING00000001656
Uncharacterized protein (437 aa)
       
  0.602
ENSCING00000024446
Uncharacterized protein (807 aa)
     
 
  0.601
ENSCING00000024030
Uncharacterized protein (57 aa)
     
 
  0.575
ENSCING00000011996
Uncharacterized protein (148 aa)
           
  0.564
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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