STRINGSTRING
ENSCING00000005449 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005449" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005449Uncharacterized protein (161 aa)    
Predicted Functional Partners:
ENSCING00000008017
Uncharacterized protein (888 aa)
     
  0.996
ap1b1
Uncharacterized protein (772 aa)
     
  0.996
ap1m1
Uncharacterized protein (422 aa)
     
  0.995
ENSCING00000007453
Uncharacterized protein (312 aa)
     
  0.973
ENSCING00000019401
Uncharacterized protein (146 aa)
     
  0.963
ENSCING00000005272
Uncharacterized protein (434 aa)
     
  0.958
ENSCING00000009755
Uncharacterized protein (954 aa)
     
  0.907
ENSCING00000002213
Coatomer subunit beta ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (965 aa)
     
  0.835
ENSCING00000018591
Uncharacterized protein (243 aa)
       
  0.813
ENSCING00000002744
Uncharacterized protein (914 aa)
       
  0.813
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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