STRINGSTRING
ENSCING00000005500 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005500" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005500Uncharacterized protein (285 aa)    
Predicted Functional Partners:
ENSCING00000003716
Uncharacterized protein (405 aa)
     
  0.960
ENSCING00000001659
Uncharacterized protein (608 aa)
       
  0.958
ENSCING00000019577
Uncharacterized protein (303 aa)
     
  0.918
ENSCING00000002066
Uncharacterized protein (502 aa)
   
  0.832
ENSCING00000002057
Uncharacterized protein (501 aa)
   
  0.832
ENSCING00000001222
Uncharacterized protein (572 aa)
   
   
 
0.822
ENSCING00000005541
Uncharacterized protein (492 aa)
   
  0.744
ENSCING00000002644
Uncharacterized protein (470 aa)
   
  0.744
Cin.23890
Uncharacterized protein (483 aa)
     
  0.622
ENSCING00000009379
Uncharacterized protein (473 aa)
     
  0.622
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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