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ENSCING00000005530 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005530" - Zinc finger protein Ci-ArfGAP-1 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005530Zinc finger protein Ci-ArfGAP-1 (760 aa)    
Predicted Functional Partners:
ENSCING00000018174
Uncharacterized protein (196 aa)
     
  0.626
ENSCING00000009452
Uncharacterized protein (207 aa)
     
  0.626
ENSCING00000004577
Uncharacterized protein (174 aa)
     
  0.626
ENSCING00000006711
Zinc finger protein Ci-ArfGAP-11 (990 aa)
     
 
  0.599
arfgap-6
Zinc finger protein (868 aa)
     
 
  0.599
ENSCING00000018836
Uncharacterized protein (326 aa)
     
  0.579
ENSCING00000002700
Uncharacterized protein (1767 aa)
     
  0.579
ENSCING00000020806
Uncharacterized protein (183 aa)
     
  0.574
ENSCING00000018958
Uncharacterized protein (190 aa)
     
  0.574
ENSCING00000022479
Uncharacterized protein (73 aa)
     
  0.574
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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