STRINGSTRING
ENSCING00000005564 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005564" - Zinc finger protein ZF(CCHC)-13 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005564Zinc finger protein ZF(CCHC)-13 (494 aa)    
Predicted Functional Partners:
ENSCING00000003455
Uncharacterized protein (482 aa)
     
  0.987
ENSCING00000007995
Uncharacterized protein (779 aa)
     
  0.984
cdc40
Uncharacterized protein (504 aa)
     
  0.968
prpf19
Uncharacterized protein (437 aa)
     
  0.963
ENSCING00000008242
Uncharacterized protein (815 aa)
     
  0.934
ENSCING00000016737
Uncharacterized protein (308 aa)
     
  0.918
ENSCING00000003877
Uncharacterized protein (365 aa)
     
  0.918
ENSCING00000003319
Zinc finger protein (349 aa)
     
  0.914
ENSCING00000013663
Uncharacterized protein (376 aa)
     
  0.910
ENSCING00000017374
Uncharacterized protein (355 aa)
     
  0.910
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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