STRINGSTRING
ENSCING00000005640 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005640" - IkappaB kinase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005640IkappaB kinase (797 aa)    
Predicted Functional Partners:
ENSCING00000008035
Zinc finger protein Ci-ZF(ZZ/RING)-1 (778 aa)
       
  0.924
zf(zz)-7
Uncharacterized protein; Zinc finger protein (619 aa)
       
  0.924
rel1
Rel1 protein (706 aa)
       
  0.714
Cin.26850
Uncharacterized protein (226 aa)
     
  0.668
ENSCING00000009957
Uncharacterized protein (87 aa)
       
  0.663
bcl3
Uncharacterized protein (1017 aa)
     
  0.663
zf(fyve)-5
Uncharacterized protein; Zinc finger protein (607 aa)
     
  0.662
ENSCING00000006550
Uncharacterized protein (400 aa)
     
  0.660
nfkbp105
NFkB protein (1202 aa)
     
  0.660
ENSCING00000018967
Uncharacterized protein (649 aa)
       
  0.659
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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