STRINGSTRING
ENSCING00000005638 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005638" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005638Uncharacterized protein (217 aa)    
Predicted Functional Partners:
ENSCING00000014118
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (262 aa)
     
  0.996
ENSCING00000003363
Uncharacterized protein (740 aa)
     
   
  0.980
ENSCING00000002409
Uncharacterized protein ; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts [...] (380 aa)
   
  0.932
mcm4
Uncharacterized protein (785 aa)
     
   
  0.927
Cin.24611
Uncharacterized protein (798 aa)
     
   
  0.926
ENSCING00000009655
DNA polymerase (2157 aa)
     
  0.915
ENSCING00000017214
Uncharacterized protein (276 aa)
     
  0.909
ENSCING00000001608
DNA polymerase (382 aa)
     
  0.909
ENSCING00000007846
Uncharacterized protein (428 aa)
     
   
  0.907
ENSCING00000014926
Uncharacterized protein (422 aa)
     
   
  0.907
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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