STRINGSTRING
ENSCING00000005659 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005659" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005659Uncharacterized protein (550 aa)    
Predicted Functional Partners:
ikbkap
Uncharacterized protein ; Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (1284 aa)
     
  0.991
ENSCING00000009103
Uncharacterized protein (762 aa)
     
  0.989
ENSCING00000007918
Uncharacterized protein (353 aa)
     
  0.985
kat2b
Uncharacterized protein (365 aa)
     
  0.858
kat2a
Uncharacterized protein (709 aa)
     
  0.858
ENSCING00000015963
Uncharacterized protein (274 aa)
     
  0.844
ENSCING00000018197
Uncharacterized protein (495 aa)
     
  0.788
nmd3
Uncharacterized protein (501 aa)
     
   
  0.768
ENSCING00000019124
Uncharacterized protein ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (344 aa)
     
 
  0.750
nfya
Uncharacterized protein (383 aa)
       
      0.733
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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