STRINGSTRING
pias-like protein (Ciona intestinalis) - STRING interaction network
"pias-like" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pias-likeZinc finger protein (1142 aa)    
Predicted Functional Partners:
ENSCING00000022254
Uncharacterized protein (99 aa)
       
  0.980
ENSCING00000017967
Uncharacterized protein (163 aa)
     
  0.977
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
  0.880
ENSCING00000014932
Uncharacterized protein (239 aa)
       
 
  0.849
ENSCING00000014118
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (262 aa)
     
 
  0.813
ENSCING00000007709
Uncharacterized protein (387 aa)
     
 
  0.788
ENSCING00000021502
Uncharacterized protein (149 aa)
     
  0.769
ENSCING00000018639
Uncharacterized protein (154 aa)
     
  0.769
ENSCING00000006860
Uncharacterized protein (251 aa)
     
  0.769
ENSCING00000003861
Uncharacterized protein (148 aa)
     
  0.769
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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