STRINGSTRING
arfgap-6 protein (Ciona intestinalis) - STRING interaction network
"arfgap-6" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arfgap-6Zinc finger protein (868 aa)    
Predicted Functional Partners:
ENSCING00000008272
Uncharacterized protein (626 aa)
       
  0.667
ENSCING00000012361
Uncharacterized protein (954 aa)
       
  0.667
ENSCING00000005530
Zinc finger protein Ci-ArfGAP-1 (760 aa)
     
 
  0.599
ENSCING00000007307
Uncharacterized protein (590 aa)
     
  0.570
ENSCING00000009526
Uncharacterized protein (217 aa)
       
  0.558
ENSCING00000005409
Uncharacterized protein (225 aa)
       
  0.558
ENSCING00000004961
Uncharacterized protein (214 aa)
       
  0.558
ENSCING00000002864
Uncharacterized protein (206 aa)
       
  0.558
ENSCING00000020806
Uncharacterized protein (183 aa)
       
  0.545
ENSCING00000018958
Uncharacterized protein (190 aa)
       
  0.545
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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