STRINGSTRING
ENSCING00000006179 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006179" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006179Uncharacterized protein (184 aa)    
Predicted Functional Partners:
ENSCING00000002871
Uncharacterized protein (288 aa)
     
        0.960
ENSCING00000006610
60S ribosome subunit biogenesis protein NIP7 homolog ; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)
     
        0.871
ENSCING00000000481
Uncharacterized protein (226 aa)
     
        0.854
ENSCING00000012967
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (427 aa)
     
        0.807
ENSCING00000004233
Uncharacterized protein (181 aa)
     
        0.804
ENSCING00000002888
Uncharacterized protein (266 aa)
     
        0.735
ENSCING00000002177
Uncharacterized protein (324 aa)
     
        0.611
ENSCING00000021761
Uncharacterized protein (243 aa)
     
        0.557
ENSCING00000024933
Uncharacterized protein (211 aa)
     
        0.522
ENSCING00000001695
Uncharacterized protein (264 aa)
     
        0.518
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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