STRINGSTRING
ENSCING00000006223 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006223" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006223Uncharacterized protein (289 aa)    
Predicted Functional Partners:
ENSCING00000006320
Uncharacterized protein (512 aa)
   
 
  0.871
ENSCING00000006006
Uncharacterized protein (567 aa)
   
 
  0.871
ENSCING00000009588
Uncharacterized protein (144 aa)
   
     
  0.739
dnajc10
Uncharacterized protein (817 aa)
     
 
  0.595
gpd2
Uncharacterized protein (683 aa)
   
   
  0.595
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
       
 
  0.556
ENSCING00000025038
Uncharacterized protein (314 aa)
     
  0.535
ENSCING00000014158
Uncharacterized protein (677 aa)
     
  0.535
ENSCING00000006522
Uncharacterized protein (367 aa)
     
  0.535
ENSCING00000003587
Uncharacterized protein (662 aa)
     
  0.535
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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