STRINGSTRING
ogt protein (Ciona intestinalis) - STRING interaction network
"ogt" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ogtUncharacterized protein (1027 aa)    
Predicted Functional Partners:
ENSCING00000003713
Uncharacterized protein (490 aa)
     
      0.866
mlx
Transcription factor protein (873 aa)
     
    0.821
insulinr
Tyrosine-protein kinase receptor (479 aa)
     
  0.819
pik3cg
Uncharacterized protein (1106 aa)
     
 
    0.818
ENSCING00000005192
Uncharacterized protein (1058 aa)
     
 
    0.818
gsk
Glycogen synthase kinase alpha/beta (407 aa)
     
  0.816
ENSCING00000004933
Uncharacterized protein (689 aa)
     
 
  0.810
ENSCING00000008043
Uncharacterized protein (512 aa)
     
 
  0.808
ENSCING00000007074
Uncharacterized protein (505 aa)
     
 
    0.807
ENSCING00000015723
Uncharacterized protein (515 aa)
         
  0.803
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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