STRINGSTRING
ciatpsyna protein (Ciona intestinalis) - STRING interaction network
"ciatpsyna" - ATP synthase alpha-subunit in Ciona intestinalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ciatpsynaATP synthase alpha-subunit ; Produces ATP from ADP in the presence of a proton gradient across the membrane (554 aa)    
Predicted Functional Partners:
ENSCING00000013793
ATP synthase gamma chain (302 aa)
 
  0.999
ENSCING00000005746
Uncharacterized protein (213 aa)
   
  0.999
ENSCING00000015264
ATP synthase subunit beta ; Produces ATP from ADP in the presence of a proton gradient across the membrane (520 aa)
 
0.999
ENSCING00000012171
Uncharacterized protein (172 aa)
   
  0.998
ENSCING00000020929
Uncharacterized protein (123 aa)
   
  0.997
ENSCING00000005181
Uncharacterized protein ; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (158 aa)
   
  0.992
ENSCING00000013735
Uncharacterized protein (177 aa)
     
  0.990
ENSCING00000008352
Uncharacterized protein (205 aa)
   
  0.989
ENSCING00000022663
Uncharacterized protein (231 aa)
     
  0.979
ENSCING00000015610
Uncharacterized protein (135 aa)
     
  0.979
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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