STRINGSTRING
heatr2 protein (Ciona intestinalis) - STRING interaction network
"heatr2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
heatr2Uncharacterized protein (847 aa)    
Predicted Functional Partners:
ic1
Axonemal outer arm dynein intermediate chain 1 (594 aa)
       
 
  0.659
ENSCING00000006778
Uncharacterized protein (433 aa)
           
  0.568
xpo6
Uncharacterized protein (1153 aa)
     
      0.562
ENSCING00000021295
Uncharacterized protein (157 aa)
       
      0.561
cstf1
Uncharacterized protein (435 aa)
       
      0.561
ENSCING00000024418
Uncharacterized protein (218 aa)
           
  0.523
ENSCING00000012691
Uncharacterized protein (304 aa)
           
  0.440
ENSCING00000012324
Uncharacterized protein (216 aa)
           
  0.440
ciaxp66.0
Axonemal p66.0 (575 aa)
           
  0.436
ic5
DC2-related axonemal dynein intermediate chain 5 (548 aa)
           
  0.436
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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