STRINGSTRING
ENSCING00000006576 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006576" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006576Uncharacterized protein (815 aa)    
Predicted Functional Partners:
ENSCING00000004677
Uncharacterized protein (842 aa)
     
  0.989
vps52
Uncharacterized protein (694 aa)
     
  0.985
ENSCING00000018597
Uncharacterized protein (335 aa)
     
  0.928
ENSCING00000018697
Uncharacterized protein (155 aa)
       
  0.904
ENSCING00000021310
Uncharacterized protein (135 aa)
       
  0.880
cog4
Uncharacterized protein (703 aa)
     
  0.801
ENSCING00000021041
Uncharacterized protein (312 aa)
     
  0.779
ENSCING00000002960
Uncharacterized protein (209 aa)
       
  0.772
cog3
Uncharacterized protein (835 aa)
     
 
  0.767
ENSCING00000022491
Uncharacterized protein (126 aa)
       
  0.724
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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