STRINGSTRING
TTN protein (Ciona intestinalis) - STRING interaction network
"TTN" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTNUncharacterized protein (21338 aa)    
Predicted Functional Partners:
ENSCING00000024490
Uncharacterized protein (173 aa)
     
  0.854
ENSCING00000006235
Uncharacterized protein (164 aa)
     
  0.770
ENSCING00000008616
Uncharacterized protein (149 aa)
     
  0.766
cam
Calmodulin ; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases (149 aa)
     
  0.766
ENSCING00000001417
Uncharacterized protein (165 aa)
     
  0.755
myh7
Uncharacterized protein (1933 aa)
     
  0.735
ENSCING00000023791
Uncharacterized protein (1927 aa)
     
  0.735
ENSCING00000009459
Uncharacterized protein (1930 aa)
     
  0.735
ENSCING00000020363
Uncharacterized protein (1972 aa)
     
  0.724
ENSCING00000021245
Uncharacterized protein (714 aa)
     
  0.724
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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