STRINGSTRING
ENSCING00000006701 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006701" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006701Uncharacterized protein (383 aa)    
Predicted Functional Partners:
ENSCING00000003982
Uncharacterized protein (202 aa)
     
 
  0.940
ENSCING00000012967
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (427 aa)
   
   
  0.884
ENSCING00000020946
Uncharacterized protein (183 aa)
     
 
  0.849
ENSCING00000001888
Uncharacterized protein (429 aa)
     
   
  0.756
ENSCING00000005314
Uncharacterized protein (501 aa)
   
        0.693
ENSCING00000001695
Uncharacterized protein (264 aa)
     
        0.662
ENSCING00000002177
Uncharacterized protein (324 aa)
     
        0.658
ENSCING00000016546
Uncharacterized protein (71 aa)
     
   
  0.612
ENSCING00000010738
Uncharacterized protein (538 aa)
     
   
  0.612
gtpbp4
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (639 aa)
     
 
  0.584
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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