STRINGSTRING
ENSCING00000006773 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006773" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006773Uncharacterized protein (452 aa)    
Predicted Functional Partners:
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
  0.864
ENSCING00000008407
Uncharacterized protein (534 aa)
     
  0.788
ENSCING00000022254
Uncharacterized protein (99 aa)
     
  0.744
r27a
R27a protein (155 aa)
     
  0.740
prpf19
Uncharacterized protein (437 aa)
     
  0.721
ENSCING00000002709
Uncharacterized protein (686 aa)
     
  0.683
Cin.19146
Uncharacterized protein ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (161 aa)
     
  0.670
ENSCING00000001601
Uncharacterized protein (144 aa)
     
  0.664
ENSCING00000006985
Uncharacterized protein (852 aa)
     
    0.662
dnajc10
Uncharacterized protein (817 aa)
   
 
  0.653
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (10%) [HD]