STRINGSTRING
ddx11 protein (Ciona intestinalis) - STRING interaction network
"ddx11" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddx11Uncharacterized protein (810 aa)    
Predicted Functional Partners:
ENSCING00000008321
Uncharacterized protein; Zinc finger protein (323 aa)
     
  0.875
ENSCING00000004652
Uncharacterized protein (551 aa)
     
  0.836
ENSCING00000007295
Uncharacterized protein (238 aa)
     
  0.797
ENSCING00000021226
Uncharacterized protein (182 aa)
     
  0.797
ENSCING00000000752
Zinc finger protein (395 aa)
     
  0.793
ENSCING00000000616
Uncharacterized protein (343 aa)
     
  0.791
ENSCING00000014118
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (262 aa)
     
  0.789
ENSCING00000002325
Uncharacterized protein (354 aa)
     
  0.783
ENSCING00000003819
Uncharacterized protein (346 aa)
     
  0.783
ENSCING00000023995
Uncharacterized protein (309 aa)
     
  0.782
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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