STRINGSTRING
ENSCING00000006848 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006848" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006848Uncharacterized protein (293 aa)    
Predicted Functional Partners:
ENSCING00000011418
Uncharacterized protein (935 aa)
     
  0.803
ENSCING00000001776
Uncharacterized protein (515 aa)
     
  0.794
ENSCING00000019533
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (225 aa)
     
  0.682
ENSCING00000025128
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (207 aa)
     
  0.682
ENSCING00000007884
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1814 aa)
     
  0.682
ENSCING00000007684
Uncharacterized protein (749 aa)
     
  0.682
ENSCING00000019523
Uncharacterized protein (124 aa)
     
  0.643
ENSCING00000024661
Serine/threonine-protein phosphatase (149 aa)
       
  0.575
ENSCING00000005224
Serine/threonine-protein phosphatase (345 aa)
       
  0.575
fhl1/2/3
Fhl1/2/3 protein (284 aa)
           
  0.562
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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