STRINGSTRING
nsf protein (Ciona intestinalis) - STRING interaction network
"nsf" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nsfUncharacterized protein (461 aa)    
Predicted Functional Partners:
scfd1
Uncharacterized protein (622 aa)
     
  0.976
ENSCING00000024830
Uncharacterized protein (295 aa)
     
  0.957
ENSCING00000010411
Uncharacterized protein (310 aa)
     
  0.934
ENSCING00000014793
Uncharacterized protein (221 aa)
     
  0.899
ENSCING00000004501
Uncharacterized protein (291 aa)
       
  0.891
ENSCING00000009600
Uncharacterized protein (214 aa)
     
  0.884
ENSCING00000023728
Proteasome subunit alpha type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (233 aa)
     
      0.883
ENSCING00000008756
Proteasome subunit alpha type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (253 aa)
       
      0.874
ENSCING00000004856
Uncharacterized protein (200 aa)
     
  0.868
ENSCING00000021310
Uncharacterized protein (135 aa)
       
  0.853
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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