STRINGSTRING
hox2 protein (Ciona intestinalis) - STRING interaction network
"hox2" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hox2Transcription factor protein; Uncharacterized protein (114 aa)    
Predicted Functional Partners:
pbx
Transcription factor protein (446 aa)
       
  0.941
ENSCING00000003118
Uncharacterized protein (278 aa)
       
 
  0.933
ENSCING00000003563
Uncharacterized protein (345 aa)
         
  0.556
LOC778715
Transcription factor protein (1039 aa)
       
  0.514
pax6
Homeobox transcription factor Pax6 (497 aa)
       
0.480
prep
Transcription factor protein (442 aa)
       
  0.479
ash2-like
Ash2-like protein (352 aa)
       
  0.464
ENSCING00000003615
Zinc finger protein 130 (1089 aa)
     
   
  0.445
pax3/7
Uncharacterized protein (673 aa)
       
  0.408
ENSCING00000008022
Uncharacterized protein (1310 aa)
       
  0.400
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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