STRINGSTRING
ciaxp66.0 protein (Ciona intestinalis) - STRING interaction network
"ciaxp66.0" - Axonemal p66.0 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ciaxp66.0Axonemal p66.0 (575 aa)    
Predicted Functional Partners:
ic2
Uncharacterized protein (661 aa)
     
 
  0.747
ic1
Axonemal outer arm dynein intermediate chain 1 (594 aa)
     
 
  0.695
ENSCING00000022961
Uncharacterized protein (257 aa)
     
 
  0.667
dnal1
Dynein light chain 1, axonemal (190 aa)
     
 
  0.657
pf-rib
Protofilament ribbon protein (379 aa)
     
   
  0.646
wdr78
Uncharacterized protein (778 aa)
     
 
  0.645
ciic3
Thioredoxin domain-containing protein 3 homolog ; May be required during the final stages of sperm tail maturation. May act by reducing disulfide bonds within the sperm components (By similarity) (653 aa)
     
 
  0.634
ENSCING00000013152
Uncharacterized protein (478 aa)
     
 
  0.620
ENSCING00000002033
Uncharacterized protein (552 aa)
     
   
  0.563
rbdlc
Roadblock-related dynein light chain (96 aa)
     
 
  0.556
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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