STRINGSTRING
ENSCING00000007005 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000007005" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000007005Uncharacterized protein (514 aa)    
Predicted Functional Partners:
ENSCING00000008843
Uncharacterized protein (376 aa)
     
  0.988
ENSCING00000013019
Uncharacterized protein (1105 aa)
     
  0.986
ENSCING00000002325
Uncharacterized protein (354 aa)
     
  0.945
ENSCING00000008321
Uncharacterized protein; Zinc finger protein (323 aa)
     
  0.935
ENSCING00000003819
Uncharacterized protein (346 aa)
     
  0.920
ENSCING00000014661
Uncharacterized protein ; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (284 aa)
     
  0.869
supt5h
Uncharacterized protein (1047 aa)
     
  0.850
ENSCING00000007884
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1814 aa)
     
  0.834
ENSCING00000005288
Uncharacterized protein (329 aa)
     
  0.828
ENSCING00000005955
Uncharacterized protein (1084 aa)
     
  0.786
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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