STRINGSTRING
ENSCING00000023381 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000023381" - DNA-directed RNA polymerase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000023381DNA-directed RNA polymerase (205 aa)    
Predicted Functional Partners:
ENSCING00000007884
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1814 aa)
   
  0.997
ENSCING00000025128
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (207 aa)
 
  0.996
ENSCING00000019533
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (225 aa)
 
  0.996
ENSCING00000007684
Uncharacterized protein (749 aa)
   
  0.995
ENSCING00000003563
Uncharacterized protein (345 aa)
   
  0.987
ENSCING00000024933
Uncharacterized protein (211 aa)
   
  0.972
ENSCING00000021895
Uncharacterized protein (286 aa)
 
  0.967
ENSCING00000009812
Uncharacterized protein (151 aa)
 
  0.964
ENSCING00000011955
Uncharacterized protein (255 aa)
     
  0.962
ENSCING00000001212
Uncharacterized protein (311 aa)
     
  0.960
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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