STRINGSTRING
slc5a1 protein (Ciona intestinalis) - STRING interaction network
"slc5a1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc5a1Uncharacterized protein (674 aa)    
Predicted Functional Partners:
ENSCING00000014375
Uncharacterized protein (169 aa)
   
   
  0.429
ENSCING00000007497
Uncharacterized protein (520 aa)
           
  0.411
ENSCING00000000433
Uncharacterized protein (453 aa)
     
      0.403
ENSCING00000004966
Uncharacterized protein (396 aa)
     
      0.403
ENSCING00000005668
Uncharacterized protein (499 aa)
           
  0.401
ENSCING00000000904
Uncharacterized protein (500 aa)
           
  0.401
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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