STRINGSTRING
ENSCING00000007139 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000007139" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000007139Uncharacterized protein (305 aa)    
Predicted Functional Partners:
Cin.27617
Uncharacterized protein (535 aa)
   
 
  0.829
ENSCING00000015948
Serine/threonine-protein phosphatase (324 aa)
   
      0.603
ENSCING00000017967
Uncharacterized protein (163 aa)
     
      0.574
ENSCING00000021102
Uncharacterized protein (402 aa)
       
      0.561
ENSCING00000000779
Ubiquitin carboxyl-terminal hydrolase (1072 aa)
       
      0.561
ENSCING00000003329
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1141 aa)
   
   
  0.485
ENSCING00000021899
Uncharacterized protein (297 aa)
   
 
  0.467
ENSCING00000022904
Uncharacterized protein (135 aa)
   
   
  0.465
ENSCING00000018498
Uncharacterized protein (178 aa)
   
   
  0.465
polr3b
DNA-directed RNA polymerase (275 aa)
   
   
  0.465
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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