STRINGSTRING
ENSCING00000007225 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000007225" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000007225Uncharacterized protein (209 aa)    
Predicted Functional Partners:
ENSCING00000025069
Uncharacterized protein ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (736 aa)
     
      0.994
ENSCING00000001858
Uncharacterized protein (225 aa)
     
      0.988
gtpbp4
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (639 aa)
     
 
  0.984
ENSCING00000006069
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (786 aa)
     
 
  0.981
ENSCING00000007514
Uncharacterized protein (351 aa)
     
      0.979
ENSCING00000021175
Uncharacterized protein ; Involved in nucleolar processing of pre-18S ribosomal RNA (233 aa)
     
   
  0.976
ENSCING00000021395
Uncharacterized protein (404 aa)
     
   
  0.975
ENSCING00000010738
Uncharacterized protein (538 aa)
     
   
  0.973
ENSCING00000016546
Uncharacterized protein (71 aa)
     
   
  0.973
ENSCING00000009238
Uncharacterized protein (834 aa)
     
 
  0.962
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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