STRINGSTRING
wdr78 protein (Ciona intestinalis) - STRING interaction network
"wdr78" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr78Uncharacterized protein (778 aa)    
Predicted Functional Partners:
ENSCING00000012330
Uncharacterized protein (902 aa)
     
   
  0.649
ciaxp66.0
Axonemal p66.0 (575 aa)
     
 
  0.645
ic5
DC2-related axonemal dynein intermediate chain 5 (548 aa)
     
 
  0.645
ENSCING00000022961
Uncharacterized protein (257 aa)
     
 
  0.625
ENSCING00000018420
Uncharacterized protein (215 aa)
     
 
  0.617
ciaxp83.9
Axonemal 84 kDa protein (735 aa)
     
   
  0.571
ENSCING00000006909
Uncharacterized protein (1114 aa)
     
 
  0.561
ENSCING00000001203
Uncharacterized protein (1319 aa)
     
 
  0.561
ENSCING00000007871
Uncharacterized protein (127 aa)
     
 
  0.544
ENSCING00000013225
Uncharacterized protein (186 aa)
     
 
  0.538
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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