STRINGSTRING
ENSCING00000005889 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005889" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000005889Uncharacterized protein (850 aa)    
Predicted Functional Partners:
ENSCING00000005921
Uncharacterized protein (999 aa)
   
 
  0.999
ENSCING00000022712
Uncharacterized protein (175 aa)
   
  0.994
ENSCING00000002929
Uncharacterized protein (934 aa)
   
 
  0.912
ENSCING00000023410
Uncharacterized protein (1269 aa)
   
 
  0.812
dld
Dihydrolipoyl dehydrogenase (509 aa)
   
 
  0.777
ENSCING00000008186
Serine hydroxymethyltransferase ; Interconversion of serine and glycine (478 aa)
   
  0.752
ENSCING00000006653
Uncharacterized protein (489 aa)
   
  0.752
ENSCING00000014490
Uncharacterized protein (290 aa)
   
 
  0.702
txnrd3
Thioredoxin reductase 3 (596 aa)
   
 
  0.664
gsr
Uncharacterized protein (472 aa)
   
 
  0.664
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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