STRINGSTRING
usp15 protein (Ciona intestinalis) - STRING interaction network
"usp15" - Ubiquitin carboxyl-terminal hydrolase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp15Ubiquitin carboxyl-terminal hydrolase (897 aa)    
Predicted Functional Partners:
ENSCING00000009762
Uncharacterized protein (896 aa)
     
 
  0.892
ENSCING00000005628
Uncharacterized protein (714 aa)
     
0.721
ENSCING00000020502
Zinc finger protein (579 aa)
     
    0.628
ENSCING00000012860
Uncharacterized protein (497 aa)
     
      0.621
ENSCING00000006652
Uncharacterized protein (954 aa)
     
      0.621
ENSCING00000004226
Ubiquitin carboxyl-terminal hydrolase (1099 aa)
     
 
  0.604
ENSCING00000020815
Uncharacterized protein (347 aa)
     
  0.579
ENSCING00000007605
Uncharacterized protein (381 aa)
     
  0.579
ENSCING00000023687
Uncharacterized protein (820 aa)
     
  0.577
ENSCING00000009462
Uncharacterized protein (216 aa)
     
  0.561
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (7%) [HD]