STRINGSTRING
calx protein (Ciona intestinalis) - STRING interaction network
"calx" - Calaxin in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
calxCalaxin (203 aa)    
Predicted Functional Partners:
ENSCING00000002710
Nitric oxide synthase ; Produces nitric oxide (NO) (1127 aa)
       
  0.965
cionakv4
Potassium channel Kv4 precursor (798 aa)
       
  0.869
ENSCING00000008827
Uncharacterized protein (847 aa)
     
 
  0.833
ENSCING00000005522
Uncharacterized protein (720 aa)
     
  0.746
cam
Calmodulin ; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases (149 aa)
       
  0.710
tni
Troponin I (225 aa)
     
  0.659
nalcn
Uncharacterized protein (131 aa)
     
  0.657
ENSCING00000004817
Uncharacterized protein (445 aa)
     
  0.638
camk2d
Uncharacterized protein (477 aa)
     
  0.638
ENSCING00000003418
Uncharacterized protein (466 aa)
     
  0.599
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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