STRINGSTRING
Cin.53997 protein (Ciona intestinalis) - STRING interaction network
"Cin.53997" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.53997Uncharacterized protein (265 aa)    
Predicted Functional Partners:
ENSCING00000001495
Uncharacterized protein (1378 aa)
     
  0.985
ENSCING00000007303
Uncharacterized protein (832 aa)
       
  0.972
ENSCING00000014788
Uncharacterized protein (124 aa)
       
  0.968
ENSCING00000016008
Uncharacterized protein (323 aa)
     
  0.966
ENSCING00000007258
Uncharacterized protein (1745 aa)
     
  0.961
ENSCING00000001648
Uncharacterized protein (638 aa)
       
  0.959
ENSCING00000002881
Uncharacterized protein (233 aa)
       
  0.953
ENSCING00000007797
Uncharacterized protein (257 aa)
       
  0.950
ENSCING00000005596
Uncharacterized protein (239 aa)
       
  0.939
ENSCING00000020865
Uncharacterized protein (210 aa)
       
  0.931
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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