STRINGSTRING
ENSCING00000007979 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000007979" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000007979Uncharacterized protein (301 aa)    
Predicted Functional Partners:
ENSCING00000006948
Uncharacterized protein (424 aa)
     
  0.989
ENSCING00000014546
Uncharacterized protein (613 aa)
     
  0.975
rbbp4
Uncharacterized protein (431 aa)
     
  0.957
ENSCING00000024184
Uncharacterized protein (264 aa)
     
  0.939
ENSCING00000014557
Uncharacterized protein (374 aa)
     
  0.939
Cin.52569
Histone deacetylase (404 aa)
   
  0.877
ENSCING00000002360
Histone deacetylase (430 aa)
   
  0.877
ENSCING00000024646
Uncharacterized protein (435 aa)
     
  0.866
zf(cxxc)-5
Cytosine-specific methyltransferase (1257 aa)
     
  0.834
ENSCING00000005798
Histone H2A (128 aa)
     
  0.822
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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