STRINGSTRING
ck-1a1 protein (Ciona intestinalis) - STRING interaction network
"ck-1a1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ck-1a1Uncharacterized protein (340 aa)    
Predicted Functional Partners:
betaTrCP
Beta-transducin repeat-containing homologue protein (621 aa)
     
  0.925
ENSCING00000001646
Uncharacterized protein (436 aa)
     
  0.918
ENSCING00000002364
Uncharacterized protein (504 aa)
     
  0.903
ddb1
Uncharacterized protein (1145 aa)
     
      0.871
ENSCING00000007020
Uncharacterized protein (273 aa)
       
  0.862
CTNNB1
Beta-catenin (497 aa)
       
  0.862
tsr1
Uncharacterized protein (784 aa)
     
  0.858
ENSCING00000005509
Uncharacterized protein (773 aa)
     
  0.799
dsh
Dishevelled homolog (685 aa)
     
  0.790
ENSCING00000021300
Uncharacterized protein (158 aa)
     
 
  0.785
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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