STRINGSTRING
ENSCING00000008006 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008006" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008006Uncharacterized protein (479 aa)    
Predicted Functional Partners:
ENSCING00000007995
Uncharacterized protein (779 aa)
     
  0.985
ENSCING00000001601
Uncharacterized protein (144 aa)
     
  0.975
ENSCING00000008407
Uncharacterized protein (534 aa)
     
  0.926
prpf19
Uncharacterized protein (437 aa)
     
  0.902
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
  0.856
aqr
Uncharacterized protein (1328 aa)
     
  0.819
zf(c3h)-12
Zinc finger protein (413 aa)
     
  0.814
ENSCING00000022206
Uncharacterized protein (486 aa)
     
  0.803
ENSCING00000009307
Uncharacterized protein (501 aa)
     
  0.795
ENSCING00000019152
Uncharacterized protein (82 aa)
     
  0.792
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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