STRINGSTRING
ENSCING00000008015 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008015" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008015Uncharacterized protein (192 aa)    
Predicted Functional Partners:
ENSCING00000020876
Uncharacterized protein (567 aa)
       
      0.520
ENSCING00000023026
Uncharacterized protein (496 aa)
         
  0.451
ENSCING00000011339
Uncharacterized protein (196 aa)
         
  0.449
ENSCING00000004662
Uncharacterized protein ; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway (183 aa)
         
  0.434
ENSCING00000012515
Uncharacterized protein (315 aa)
       
  0.430
ENSCING00000007795
Uncharacterized protein (566 aa)
           
  0.428
ENSCING00000002124
Uncharacterized protein (163 aa)
         
  0.419
ENSCING00000005461
Uncharacterized protein (255 aa)
         
  0.411
ENSCING00000022828
Uncharacterized protein (96 aa)
         
  0.411
ENSCING00000004454
Uncharacterized protein (441 aa)
         
  0.411
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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