STRINGSTRING
ENSCING00000008117 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008117" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008117Uncharacterized protein (348 aa)    
Predicted Functional Partners:
ENSCING00000012156
Uncharacterized protein (177 aa)
 
            0.672
Cin.13544
Uncharacterized protein (239 aa)
 
            0.663
ENSCING00000013476
Uncharacterized protein (838 aa)
     
   
  0.645
ENSCING00000004452
Uncharacterized protein (356 aa)
           
  0.569
ENSCING00000019361
Uncharacterized protein (302 aa)
           
  0.568
ENSCING00000004961
Uncharacterized protein (214 aa)
     
   
  0.565
ccdc39
Uncharacterized protein (238 aa)
     
   
  0.546
ci-rsp4/6
Uncharacterized protein LOC100180393 (527 aa)
     
   
  0.503
ENSCING00000004270
Uncharacterized protein (679 aa)
     
   
  0.481
ccdc40
Uncharacterized protein (864 aa)
     
   
  0.479
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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